IR@PKUHSC  > 北京大学基础医学院  > 药理学系
学科主题基础医学
Analysis of genetic diversity in Ganoderma population with a novel molecular marker SRAP
Sun, Shu-Jing; Gao, Wei; Lin, Shu-Qian; Zhu, Jian; Xie, Bao-Gui; Lin, Zhi-Bin
刊名APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
2006-09-01
DOI10.1007/s00253-005-0299-9
72期:3页:537-543
收录类别SCI
文章类型Article
WOS标题词Science & Technology
类目[WOS]Biotechnology & Applied Microbiology
研究领域[WOS]Biotechnology & Applied Microbiology
关键词[WOS]ANTICANCER AGENTS ; LUCIDUM ; POLYMORPHISM ; ANTITUMOR ; BRASSICA ; SEQUENCE ; AFLP
英文摘要

Genetic marker technology designed to detect naturally occurring polymorphisms at the DNA level had become an invaluable and revolutionizing tool for both applied and basic studies of fungi. To eliminate the confusion on the taxonomy of Ganoderma strains, in this study, a collection of 31 accessions representative of morphotypes and some unclassified types was used for analyzing molecular diversity using a novel molecular marker sequence-related amplified polymorphism (SRAP). This collection included commercial cultivars and wild varieties that represented the great diversification of types from different countries and regions. The experimental results showed that 50 out of 95 combinations of primers turned out to be polymorphic, and 85 polymorphism bands were obtained using six combinations. Based on the appearances of markers, the genetic similarity coefficients were calculated, and genetic variations were observed (0 similar to 1) among the 31 different Ganoderma strains. The group of Ganoderma lucidum showed significant differences from the group of Ganoderma sinense. Moreover, G. lucidum in China was also different from G. lucidum in Yugoslavia. At the same time, cluster analysis successfully categorized these 31 Ganoderma strains into five groups. These results revealed the genetic diversity of Ganoderma strains and their correlation with geographic environments. It also suggested SRAP marker could be used in the taxonomic analysis of fungi. To our knowledge, this is the first application of SRAP marker on the systematics of Ganoderma strains within basidiomycetes.

语种英语
WOS记录号WOS:000239956200017
引用统计
被引频次:53[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.bjmu.edu.cn/handle/400002259/57256
专题北京大学基础医学院_药理学系
作者单位1.Green Valley Inst Biopharmaceut Technol, Fuzhou 350002, Peoples R China
2.Fujian Agr & Forestry Univ, Coll Life Sci, Fuzhou 350002, Peoples R China
3.Fujian Agr & Forestry Univ, Coll Hort, Fuzhou 350002, Peoples R China
4.Peking Univ, Sch Basic Med Sci, Dept Pharmacol, Beijing 10083, Peoples R China
推荐引用方式
GB/T 7714
Sun, Shu-Jing,Gao, Wei,Lin, Shu-Qian,et al. Analysis of genetic diversity in Ganoderma population with a novel molecular marker SRAP[J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,2006,72(3):537-543.
APA Sun, Shu-Jing,Gao, Wei,Lin, Shu-Qian,Zhu, Jian,Xie, Bao-Gui,&Lin, Zhi-Bin.(2006).Analysis of genetic diversity in Ganoderma population with a novel molecular marker SRAP.APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,72(3),537-543.
MLA Sun, Shu-Jing,et al."Analysis of genetic diversity in Ganoderma population with a novel molecular marker SRAP".APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 72.3(2006):537-543.
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